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YAZAWA HPLC COLUMN SCHOOL

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The HPLC column pressure has increased

The HPLC Column Pressure is High!
There are several possible causes that can explain this issue:

1. Pressure of a New Column

If you notice that the pressure is high when starting analysis with a brand-new column, it may be because the new column differs from the one you previously used.

Under the same analytical conditions, the smaller the particle size of the packing material, the higher the column pressure.
For example, if you previously used a column with 5 µm particles and switched to one with 3 µm particles (with the same column dimensions), the column pressure will be more than twice as high under the same conditions.

Column pressure is inversely proportional to the square of the particle size. A 1.5 µm column, for instance, will generate four times the pressure of a 3 µm column. However, resolution only improves in proportion to the square root of the particle size, meaning the resolution gain is only about 1.4 times.

Choosing a small-particle column without proper consideration may increase the risk of pressure-related issues such as solvent leaks in the HPLC system. Considering potential connection problems and maintenance due to leaks, a column with a particle size of around 3 µm is generally the most appropriate choice for most current HPLC systems.

(Reference)
The Practical Advantages of 3 µm Particle Columns

 

2. Insoluble Components in the Injected Sample

The sample solution injected into the column must be completely clear, even if it is colored.
If the solution is even slightly turbid, particulate matter can be introduced into the column, causing a rapid increase in backpressure.

To remove turbidity, it is common to filter the sample using a 0.45 µm or 0.2 µm membrane filter, but this does not guarantee complete removal. Submicron particles, typically in the range of a few hundred nanometers, can still pass through and accumulate at the column inlet with each injection, gradually raising the column pressure.

In most cases, once pressure increases, it cannot be fully restored. However, in rare situations where clogging occurs at the inlet frit, reversing the column connection may allow the accumulated particles to be flushed out, resulting in a drop in pressure.
Note that not all columns are designed for reverse flow—always check the manufacturer’s guidelines before attempting reverse flushing.

 

3. Macromolecular impurities

Biological samples often contain a variety of high-molecular-weight compounds, such as proteins, DNA, and polysaccharides. These substances are generally hydrophilic and may dissolve completely in the injection solvent, resulting in a clear solution. However, once injected into the column, they can be trapped by the packing material and remain inside the column.

This is especially problematic when using organic solvents like acetonitrile in the mobile phase, which tend to promote aggregation. High-molecular-weight compounds that form aggregates inside the column can lead to increased backpressure and are typically very difficult—or even impossible—to remove through standard washing procedures.

Therefore, if such macromolecules are present in the sample but are not the target of analysis, they must be removed through sample pretreatment. Since they are dissolved in solution, membrane filtration is not effective for their removal.

One method for removing serum proteins involves mixing the sample with an equal volume of 0.4 M perchloric acid or 5% sulfosalicylic acid to denature and precipitate the proteins, followed by centrifugation to separate them from the solution.

(Reference)
Deproteinization for LC-MS Analysis of Amino Acids in Serum

 

4. Column Degradation

When the packing material undergoes hydrolysis due to the mobile phase, the silica particles may degrade and break down into fine particles, leading to clogging inside the column. This can result in a rise in column pressure. In such cases, voids or channeling often occur, causing severely distorted peak shapes.

Column regeneration is not possible in this situation, and the only solution is to replace the column with a new one.

For silica-based columns, prolonged analysis under alkaline conditions (pH > 7) increases the likelihood of silica hydrolysis. If alkaline analysis is not required, it is advisable to perform the analysis at neutral or acidic pH to preserve column integrity.

 

As a column is used over time, various factors can gradually cause an increase in pressure.
If the column pressure is high but there are no issues with peak shape or compound separation, it is often more efficient to continue using the column as is—by raising the pump’s pressure limit and carefully monitoring for any potential leaks in the flow path.


YD01 / YAZAWA Itaru, hplc@imtakt.com